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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Feb 08, 2024 |
| Title |
GeoMx human immuno-oncology protein panels |
| Technology type |
other |
| Distribution |
custom-commercial |
| Organism |
Homo sapiens |
| Manufacturer |
NanoString |
| Manufacture protocol |
see manufacturer's website
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| Submission date |
Sep 01, 2023 |
| Last update date |
Feb 09, 2024 |
| Contact name |
Yujin Hoshida |
| E-mail(s) |
Yujin.Hoshida@UTSouthwestern.edu
|
| Organization name |
University of Texas Southwestern Medical Center
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| Street address |
5323 Harry Hines Blvd
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| City |
Dallas |
| State/province |
TX |
| ZIP/Postal code |
75390 |
| Country |
USA |
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| Samples (251)
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GSM7749740, GSM7749741, GSM7749742, GSM7749743, GSM7749744, GSM7749745
GSM7749746, GSM7749747, GSM7749748, GSM7749749, GSM7749750, GSM7749751, GSM7749752, GSM7749753, GSM7749754, GSM7749755, GSM7749756, GSM7749757, GSM7749758, GSM7749759, GSM7749760, GSM7749761, GSM7749762, GSM7749763, GSM7749764, GSM7749765, GSM7749766, GSM7749767, GSM7749768, GSM7749769, GSM7749770, GSM7749771, GSM7749772, GSM7749773, GSM7749774, GSM7749775, GSM7749776, GSM7749777, GSM7749778, GSM7749779, GSM7749780, GSM7749781, GSM7749782, GSM7749783, GSM7749784, GSM7749785, GSM7749786, GSM7749787, GSM7749788, GSM7749789, GSM7749790, GSM7749791, GSM7749792, GSM7749793, GSM7749794, GSM7749795, GSM7749796, GSM7749797, GSM7749798, GSM7749799, GSM7749800, GSM7749801, GSM7749802, GSM7749803, GSM7749804, GSM7749805, GSM7749806, GSM7749807, GSM7749808, GSM7749809, GSM7749810, GSM7749811, GSM7749812, GSM7749813, GSM7749814, GSM7749815, GSM7749816, GSM7749817, GSM7749818, GSM7749819, GSM7749820, GSM7749821, GSM7749822, GSM7749823, GSM7749824, GSM7749825, GSM7749826, GSM7749827, GSM7749828, GSM7749829, GSM7749830, GSM7749831, GSM7749832, GSM7749833, GSM7749834, GSM7749835, GSM7749836, GSM7749837, GSM7749838, GSM7749839, GSM7749840, GSM7749841, GSM7749842, GSM7749843, GSM7749844, GSM7749845, GSM7749846, GSM7749847, GSM7749848, GSM7749849, GSM7749850, GSM7749851, GSM7749852, GSM7749853, GSM7749854, GSM7749855, GSM7749856, GSM7749857, GSM7749858, GSM7749859, GSM7749860, GSM7749861, GSM7749862, GSM7749863, GSM7749864, GSM7749865, GSM7749866, GSM7749867, GSM7749868, GSM7749869, GSM7749870, GSM7749871, GSM7749872, GSM7749873, GSM7749874, GSM7749875, GSM7749876, GSM7749877, GSM7749878, GSM7749879, GSM7749880, GSM7749881, GSM7749882, GSM7749883, GSM7749884, GSM7749885, GSM7749886, GSM7749887, GSM7749888, GSM7749889, GSM7749890, GSM7749891, GSM7749892, GSM7749893, GSM7749894, GSM7749895, GSM7749896, GSM7749897, GSM7749898, GSM7749899, GSM7749900, GSM7749901, GSM7749902, GSM7749903, GSM7749904, GSM7749905, GSM7749906, GSM7749907, GSM7749908, GSM7749909, GSM7749910, GSM7749911, GSM7749912, GSM7749913, GSM7749914, GSM7749915, GSM7749916, GSM7749917, GSM7749918, GSM7749919, GSM7749920, GSM7749921, GSM7749922, GSM7749923, GSM7749924, GSM7749925, GSM7749926, GSM7749927, GSM7749928, GSM7749929, GSM7749930, GSM7749931, GSM7749932, GSM7749933, GSM7749934, GSM7749935, GSM7749936, GSM7749937, GSM7749938, GSM7749939, GSM7749940, GSM7749941, GSM7749942, GSM7749943, GSM7749944, GSM7749945, GSM7749946, GSM7749947, GSM7749948, GSM7749949, GSM7749950, GSM7749951, GSM7749952, GSM7749953, GSM7749954, GSM7749955, GSM7749956, GSM7749957, GSM7749958, GSM7749959, GSM7749960, GSM7749961, GSM7749962, GSM7749963, GSM7749964, GSM7749965, GSM7749966, GSM7749967, GSM7749968, GSM7749969, GSM7749970, GSM7749971, GSM7749972, GSM7749973, GSM7749974, GSM7749975, GSM7749976, GSM7749977, GSM7749978, GSM7749979, GSM7749980, GSM7749981, GSM7749982, GSM7749983, GSM7749984, GSM7749985, GSM7749986, GSM7749987, GSM7749988, GSM7749989, GSM7749990
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| Series (1) |
| GSE242154 |
Spatial immuno-oncology protein abundance profiles in hepatocellular carcinoma tissues from patients treated with bavituximab and pembrolizumab |
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| Data table header descriptions |
| ID |
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| Probe_ID |
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| SPOT_ID |
Uniprot_ID |
| GeoMx _panel |
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| Protein_group |
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| Data table |
| ID |
Probe_ID |
SPOT_ID |
GeoMx _panel |
Protein_group |
| 4-1BB |
DPROT_00026.1 |
Q07011 |
IO_Drug_Target |
T cell Activation;T cells |
| ARG1 |
DPROT_00031.1 |
P05089 |
IO_Drug_Target |
Myeloid Supression;Macrophage;M2 Macrophage;Myeloid Activation;Myeloid |
| B7-H3 |
DPROT_00032.1 |
Q5ZPR3,A0A0C4DGH0,A8K9J6 |
IO_Drug_Target |
Checkpoint |
| Bcl-2 |
DPROT_00057.1 |
A0A024R2B3,P10415,A0A024R2C4 |
Pan-Tumor |
Apoptosis;Tumor |
| Beta-2-microglobulin |
DPROT_00010.1 |
P61769 |
Immune_Cell_Profiling |
Tumor;Antigen Presentation |
| CD11c |
DPROT_00011.1 |
P20702,H3BN02 |
Immune_Cell_Profiling |
DC;Myeloid |
| CD127 |
DPROT_00036.1 |
P16871 |
Immune_Activation_Status |
Naive and Memory;T cells |
| CD14 |
DPROT_00051.1 |
P08571 |
Immune_Cell_Typing |
Monocyte;Myeloid |
| CD163 |
DPROT_00052.1 |
Q86VB7 |
Immune_Cell_Typing |
Macrophage;M2 Macrophage;Myeloid |
| CD20 |
DPROT_00012.1 |
A0A024R507,P11836 |
Immune_Cell_Profiling |
B cells |
| CD25 |
DPROT_00037.1 |
P01589,Q5W005 |
Immune_Activation_Status |
Tregs;T cell Activation;T cells |
| CD27 |
DPROT_00045.1 |
P26842 |
Immune_Activation_Status |
T cell Activation;T cells |
| CD3 |
DPROT_00013.1 |
B0YIY5,P09693,P07766,B0YIY4,P04234 |
Immune_Cell_Profiling |
T cells |
| CD34 |
DPROT_00048.1 |
P28906 |
Immune_Cell_Typing |
Hematopoietic |
| CD4 |
DPROT_00014.1 |
B4DT49,P01730,B0AZV7 |
Immune_Cell_Profiling |
Th cells;Myeloid;T cells |
| CD40 |
DPROT_00042.1 |
A0A0S2Z3C7,P25942,Q6P2H9,A0A0S2Z349 |
Immune_Activation_Status |
Myeloid Activation;Myeloid |
| CD44 |
DPROT_00044.1 |
P16070 |
Immune_Activation_Status |
T cell Activation |
| CD45 |
DPROT_00015.1 |
M9MML4,A0A0A0MT22,P08575,X6R433 |
Immune_Cell_Profiling |
Total Immune |
| CD45RO |
DPROT_00046.1 |
M9MML4,A0A0A0MT22,P08575,X6R433 |
Immune_Cell_Typing |
Memory;T cells |
| CD56 |
DPROT_00016.1 |
P13591,A0A087WWD4 |
Immune_Cell_Profiling |
NK cells |
Total number of rows: 58
Table truncated, full table size 4 Kbytes.
| Supplementary data files not provided |
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