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Series GSE242154 Query DataSets for GSE242154
Status Public on Feb 08, 2024
Title Spatial immuno-oncology protein abundance profiles in hepatocellular carcinoma tissues from patients treated with bavituximab and pembrolizumab
Organism Homo sapiens
Experiment type Protein profiling by protein array
Summary Immune checkpoint inhibitors (ICIs) targeting PD-1/L1 have modest efficacy in hepatocellular carcinoma (HCC) as single agents, but combination regimens have demonstrated increased clinical benefit at the expense of treatment toxicities. Exposed phosphatidylserine suppresses the innate immune response in the tumor microenvironment (TME). Targeting phosphatidylserine does not induce tumor responses in the clinical setting when used as monotherapy or in combination with cytotoxic and targeted therapies, but may induce pro-inflammatory and –immune stimulating effects that enhance ICI activity. This hypothesis was tested in a single-arm phase 2 trial evaluating bavituximab, a phosphatidylserine targeting antibody, plus pembrolizumab in patients with unresectable HCC who had not received prior systemic treatments (ClinicalTrials.gov ID: NCT03519997). The primary end point was investigator-assessed objective response rate (ORR) among evaluable patients, and secondary end points included progression-free survival (PFS) and the incidence of adverse events. Among 28 evaluable patients, the ORR was 32.1%, including 2 complete responses, and a disease control rate of 64.3%. Median PFS was 6.3 months (95% CI, 1.3-11.3 months). Treatment related adverse events of any grade occurred in 45.7% of patients with grade 3 or 4 adverse events occurring in 14.3% of patients. Exploratory analyses of baseline tumor specimens showed that a depletion of B cells, and the expression of smooth muscle actin and immune checkpoints in stroma was associated with tumor response. An RNA-based TME assay which distinguishes immune-rich of inflammatory tumors was also shown to be predictive of ORR. These results suggest that targeting phosphatidylserine may lead to synergistic effects with ICIs without increasing toxicity rates, and future studies on this therapeutic strategy may be guided by biomarkers characterizing the TME.
 
Overall design Pre-treatment tumor and liver biopsy tissues were obtained from patients with unresectable hepatocellular carcinoma treated with bavituximab and pembrolizumab, and subjected to the Digital Spatial Profiling GeoMx assay.
 
Contributor(s) Kubota N, Hassan A, Katz C, Paritala S, Hsiehchen D, Hoshida Y
Citation(s) 38467639
Submission date Sep 01, 2023
Last update date Mar 20, 2024
Contact name Yujin Hoshida
E-mail(s) Yujin.Hoshida@UTSouthwestern.edu
Organization name University of Texas Southwestern Medical Center
Street address 5323 Harry Hines Blvd
City Dallas
State/province TX
ZIP/Postal code 75390
Country USA
 
Platforms (1)
GPL33726 GeoMx human immuno-oncology protein panels
Samples (251)
GSM7749740 PB01004_tumor_roi008_CancerCell
GSM7749741 PB01004_liver_roi009_ImmuneCell
GSM7749742 PB01004_liver_roi009_BileDuct
Relations
BioProject PRJNA1011873

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE242154_RAW.tar 274.0 Mb (http)(custom) TAR (of PNG)
GSE242154_non-normalized.txt.gz 84.7 Kb (ftp)(http) TXT
Processed data included within Sample table

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