|
| Status |
Public on Feb 02, 2018 |
| Title |
PRMT1 and CSNK1a1 control epidermal progenitor maintanence (PRMT1 ChIP-seq data set) |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
Here we determine the genome-wide binding sites of PRMT1 in primary human keratinocytes. We also investigated the impact of casein kinase inhibitor D4476 on PRMT1 genomic binding.
|
| |
|
| Overall design |
HA-PRMT1 was expressed at near endogenous level in primary keratinocytes. Two independent HA antibodies were used for PRMT1 ChIP-seq. The CSNK1a1 inhibitor D4476 was added to keratinocyte culture to characterize the role of CSNK1a1 on controlling PRMT1 genomic binding.
|
| |
|
| Contributor(s) |
Bao X, Rubin A, Kun Q, Khavari P |
| Citation(s) |
28943242 |
| Submission date |
Feb 02, 2018 |
| Last update date |
Oct 11, 2022 |
| Contact name |
Douglas Porter |
| Organization name |
Stanford
|
| Department |
Dermatology
|
| Lab |
Khavari
|
| Street address |
269 Campus Drive
|
| City |
Stanford |
| State/province |
CA |
| ZIP/Postal code |
94305 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL18573 |
Illumina NextSeq 500 (Homo sapiens) |
|
| Samples (4)
|
|
| This SubSeries is part of SuperSeries: |
| GSE81942 |
PRMT1 and CSNK1a1 control epidermal progenitor maintenance |
|
| Relations |
| BioProject |
PRJNA432778 |
| SRA |
SRP132118 |
Less...
More...