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Sample GSM4953751 Query DataSets for GSM4953751
Status Public on Mar 18, 2021
Title S4807 C1
Sample type protein
 
Source name Primary beta-cells
Organism Homo sapiens
Characteristics cell type: Primary beta-cells
group: bGal_negative
Extracted molecule protein
Extraction protocol Primary beta-cells were culture in serum-free medium and used conditioned media were collected.
Label n.a.
Label protocol As described elsewhere (http://www.somalogic.com/wp-content/uploads/2016/08/SSM-002-Rev-3-SOMAscan-Technical-White-Paper.pdf)
 
Hybridization protocol As described elsewhere (http://www.somalogic.com/wp-content/uploads/2016/08/SSM-002-Rev-3-SOMAscan-Technical-White-Paper.pdf)
Scan protocol As described elsewhere (http://www.somalogic.com/wp-content/uploads/2016/08/SSM-002-Rev-3-SOMAscan-Technical-White-Paper.pdf)
Data processing Normalization and interrun calibration were performed as described elsewhere (http://www.somalogic.com/wp-content/uploads/2016/08/SSM-002-Rev-3-SOMAscan-Technical-White-Paper.pdf) In brief, correction for systematic effects on the data introduced during the hybridization step, median normalization within an array, and calibration between plates were performed.
 
Submission date Dec 02, 2020
Last update date Mar 18, 2021
Contact name Hui Pan
E-mail(s) Hui.Pan@joslin.harvard.edu
Organization name Joslin Diabetes Center
Department Bioinformatics and Biostatistics Core
Street address 1 Joslin Place
City Boston
ZIP/Postal code 02215
Country USA
 
Platform ID GPL28516
Series (1)
GSE162521 Unique human beta-cell senescence-associated secretory phenotype (SASP) reveal conserved signaling pathways and heterogeneous factors

Data table header descriptions
ID_REF
VALUE Log2 intensity

Data table
ID_REF VALUE
SL019100 8.467177909
SL007136 9.188546648
SL001731 10.0643457
SL019096 6.787841439
SL005173 10.60031347
SL007221 7.405552523
SL007108 11.36303335
SL000455 8.986511982
SL003755 8.339922346
SL014684 6.406751272
SL002565 7.392300116
SL004097 10.19098393
SL004101 7.882215408
SL005184 7.577208732
SL001728 8.966328454
SL001716 6.11271081
SL004396 6.231123318
SL007229 7.720026055
SL017128 11.09367054
SL001791 9.558724409

Total number of rows: 1317

Table truncated, full table size 26 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
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