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Sample GSM4953752 Query DataSets for GSM4953752
Status Public on Mar 18, 2021
Title S601 C3
Sample type protein
 
Source name Primary beta-cells
Organism Homo sapiens
Characteristics cell type: Primary beta-cells
group: bGal_negative
Extracted molecule protein
Extraction protocol Primary beta-cells were culture in serum-free medium and used conditioned media were collected.
Label n.a.
Label protocol As described elsewhere (http://www.somalogic.com/wp-content/uploads/2016/08/SSM-002-Rev-3-SOMAscan-Technical-White-Paper.pdf)
 
Hybridization protocol As described elsewhere (http://www.somalogic.com/wp-content/uploads/2016/08/SSM-002-Rev-3-SOMAscan-Technical-White-Paper.pdf)
Scan protocol As described elsewhere (http://www.somalogic.com/wp-content/uploads/2016/08/SSM-002-Rev-3-SOMAscan-Technical-White-Paper.pdf)
Data processing Normalization and interrun calibration were performed as described elsewhere (http://www.somalogic.com/wp-content/uploads/2016/08/SSM-002-Rev-3-SOMAscan-Technical-White-Paper.pdf) In brief, correction for systematic effects on the data introduced during the hybridization step, median normalization within an array, and calibration between plates were performed.
 
Submission date Dec 02, 2020
Last update date Mar 18, 2021
Contact name Hui Pan
E-mail(s) Hui.Pan@joslin.harvard.edu
Organization name Joslin Diabetes Center
Department Bioinformatics and Biostatistics Core
Street address 1 Joslin Place
City Boston
ZIP/Postal code 02215
Country USA
 
Platform ID GPL28516
Series (1)
GSE162521 Unique human beta-cell senescence-associated secretory phenotype (SASP) reveal conserved signaling pathways and heterogeneous factors

Data table header descriptions
ID_REF
VALUE Log2 intensity

Data table
ID_REF VALUE
SL019100 8.394752593
SL007136 9.350565168
SL001731 10.75167045
SL019096 6.468056725
SL005173 10.20839349
SL007221 8.182075327
SL007108 10.05007495
SL000455 9.081847879
SL003755 8.34396902
SL014684 6.018189242
SL002565 6.770261729
SL004097 10.71964843
SL004101 7.874465243
SL005184 7.013360133
SL001728 8.436837995
SL001716 5.481232114
SL004396 6.864444168
SL007229 7.581292309
SL017128 11.28571127
SL001791 9.881024658

Total number of rows: 1317

Table truncated, full table size 26 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
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