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Sample GSM4953755 Query DataSets for GSM4953755
Status Public on Mar 18, 2021
Title S9901 F2
Sample type protein
 
Source name Primary beta-cells
Organism Homo sapiens
Characteristics cell type: Primary beta-cells
group: bGal_negative
Extracted molecule protein
Extraction protocol Primary beta-cells were culture in serum-free medium and used conditioned media were collected.
Label n.a.
Label protocol As described elsewhere (http://www.somalogic.com/wp-content/uploads/2016/08/SSM-002-Rev-3-SOMAscan-Technical-White-Paper.pdf)
 
Hybridization protocol As described elsewhere (http://www.somalogic.com/wp-content/uploads/2016/08/SSM-002-Rev-3-SOMAscan-Technical-White-Paper.pdf)
Scan protocol As described elsewhere (http://www.somalogic.com/wp-content/uploads/2016/08/SSM-002-Rev-3-SOMAscan-Technical-White-Paper.pdf)
Data processing Normalization and interrun calibration were performed as described elsewhere (http://www.somalogic.com/wp-content/uploads/2016/08/SSM-002-Rev-3-SOMAscan-Technical-White-Paper.pdf) In brief, correction for systematic effects on the data introduced during the hybridization step, median normalization within an array, and calibration between plates were performed.
 
Submission date Dec 02, 2020
Last update date Mar 18, 2021
Contact name Hui Pan
E-mail(s) Hui.Pan@joslin.harvard.edu
Organization name Joslin Diabetes Center
Department Bioinformatics and Biostatistics Core
Street address 1 Joslin Place
City Boston
ZIP/Postal code 02215
Country USA
 
Platform ID GPL28516
Series (1)
GSE162521 Unique human beta-cell senescence-associated secretory phenotype (SASP) reveal conserved signaling pathways and heterogeneous factors

Data table header descriptions
ID_REF
VALUE Log2 intensity

Data table
ID_REF VALUE
SL019100 8.433627977
SL007136 8.673774423
SL001731 10.3072485
SL019096 5.876392692
SL005173 9.979067874
SL007221 7.310978587
SL007108 11.21904273
SL000455 8.539164972
SL003755 8.096691216
SL014684 6.398999115
SL002565 7.182118834
SL004097 9.4138969
SL004101 7.603069026
SL005184 7.360249381
SL001728 8.489158303
SL001716 5.923225857
SL004396 6.254340872
SL007229 7.55812162
SL017128 10.89627971
SL001791 9.586657202

Total number of rows: 1317

Table truncated, full table size 26 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
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