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Sample GSM4953758 Query DataSets for GSM4953758
Status Public on Mar 18, 2021
Title S601 B3
Sample type protein
 
Source name Primary beta-cells
Organism Homo sapiens
Characteristics cell type: Primary beta-cells
group: bGal_positive
Extracted molecule protein
Extraction protocol Primary beta-cells were culture in serum-free medium and used conditioned media were collected.
Label n.a.
Label protocol As described elsewhere (http://www.somalogic.com/wp-content/uploads/2016/08/SSM-002-Rev-3-SOMAscan-Technical-White-Paper.pdf)
 
Hybridization protocol As described elsewhere (http://www.somalogic.com/wp-content/uploads/2016/08/SSM-002-Rev-3-SOMAscan-Technical-White-Paper.pdf)
Scan protocol As described elsewhere (http://www.somalogic.com/wp-content/uploads/2016/08/SSM-002-Rev-3-SOMAscan-Technical-White-Paper.pdf)
Data processing Normalization and interrun calibration were performed as described elsewhere (http://www.somalogic.com/wp-content/uploads/2016/08/SSM-002-Rev-3-SOMAscan-Technical-White-Paper.pdf) In brief, correction for systematic effects on the data introduced during the hybridization step, median normalization within an array, and calibration between plates were performed.
 
Submission date Dec 02, 2020
Last update date Mar 18, 2021
Contact name Hui Pan
E-mail(s) Hui.Pan@joslin.harvard.edu
Organization name Joslin Diabetes Center
Department Bioinformatics and Biostatistics Core
Street address 1 Joslin Place
City Boston
ZIP/Postal code 02215
Country USA
 
Platform ID GPL28516
Series (1)
GSE162521 Unique human beta-cell senescence-associated secretory phenotype (SASP) reveal conserved signaling pathways and heterogeneous factors

Data table header descriptions
ID_REF
VALUE Log2 intensity

Data table
ID_REF VALUE
SL019100 8.217453916
SL007136 9.760523231
SL001731 9.437379237
SL019096 6.438158777
SL005173 10.25885628
SL007221 7.530527629
SL007108 9.759088985
SL000455 9.504861995
SL003755 8.400417435
SL014684 5.690345801
SL002565 6.846948129
SL004097 11.42260555
SL004101 8.051519273
SL005184 7.038829861
SL001728 8.740376073
SL001716 5.263393823
SL004396 6.461044452
SL007229 7.499195589
SL017128 11.24600348
SL001791 9.287990271

Total number of rows: 1317

Table truncated, full table size 26 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
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