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Sample GSM4953761 Query DataSets for GSM4953761
Status Public on Mar 18, 2021
Title S9901 E2
Sample type protein
 
Source name Primary beta-cells
Organism Homo sapiens
Characteristics cell type: Primary beta-cells
group: bGal_positive
Extracted molecule protein
Extraction protocol Primary beta-cells were culture in serum-free medium and used conditioned media were collected.
Label n.a.
Label protocol As described elsewhere (http://www.somalogic.com/wp-content/uploads/2016/08/SSM-002-Rev-3-SOMAscan-Technical-White-Paper.pdf)
 
Hybridization protocol As described elsewhere (http://www.somalogic.com/wp-content/uploads/2016/08/SSM-002-Rev-3-SOMAscan-Technical-White-Paper.pdf)
Scan protocol As described elsewhere (http://www.somalogic.com/wp-content/uploads/2016/08/SSM-002-Rev-3-SOMAscan-Technical-White-Paper.pdf)
Data processing Normalization and interrun calibration were performed as described elsewhere (http://www.somalogic.com/wp-content/uploads/2016/08/SSM-002-Rev-3-SOMAscan-Technical-White-Paper.pdf) In brief, correction for systematic effects on the data introduced during the hybridization step, median normalization within an array, and calibration between plates were performed.
 
Submission date Dec 02, 2020
Last update date Mar 18, 2021
Contact name Hui Pan
E-mail(s) Hui.Pan@joslin.harvard.edu
Organization name Joslin Diabetes Center
Department Bioinformatics and Biostatistics Core
Street address 1 Joslin Place
City Boston
ZIP/Postal code 02215
Country USA
 
Platform ID GPL28516
Series (1)
GSE162521 Unique human beta-cell senescence-associated secretory phenotype (SASP) reveal conserved signaling pathways and heterogeneous factors

Data table header descriptions
ID_REF
VALUE Log2 intensity

Data table
ID_REF VALUE
SL019100 8.052297096
SL007136 8.791566527
SL001731 9.512726498
SL019096 5.550528531
SL005173 10.3011489
SL007221 7.230736468
SL007108 10.69747021
SL000455 9.182144658
SL003755 8.324179342
SL014684 6.154026983
SL002565 7.065412596
SL004097 10.4922339
SL004101 7.785304677
SL005184 7.234612078
SL001728 8.70272594
SL001716 5.777355924
SL004396 6.210216924
SL007229 7.490209062
SL017128 11.08781389
SL001791 9.30932609

Total number of rows: 1317

Table truncated, full table size 26 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
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