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GEO accession:
Series GSE250559
Query DataSets for GSE250559
Status
Public on Jan 13, 2024
Title
MAPK
Organism
Homo sapiens
Experiment type
Expression profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation missing
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Submission date
Dec 19, 2023
Last update date
Jan 15, 2024
Contact name
Nils Blüthgen
E-mail(s)
nils.bluethgen@charite.de
Organization name
Charite Universitätsmedizin Berlin
Department
Institute of Pathology
Street address
Chariteplatz 1
City
Berlin
ZIP/Postal code
10117
Country
Germany
Platforms (2)
GPL11154
Illumina HiSeq 2000 (Homo sapiens)
GPL24676
Illumina NovaSeq 6000 (Homo sapiens)
Samples (182)
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GSM7980953
EGR1_FOS-clone_1-12_hrs-R1
GSM7980954
EGR1_FOS-clone_1-12_hrs-R2
GSM7980955
EGR1_FOS-clone_1-12_hrs-R3
GSM7980956
EGR1_FOS-clone_1-18_hrs-R1
GSM7980957
EGR1_FOS-clone_1-18_hrs-R2
GSM7980958
EGR1_FOS-clone_1-18_hrs-R3
GSM7980959
EGR1_FOS-clone_1-6_hrs-R1
GSM7980960
EGR1_FOS-clone_1-6_hrs-R2
GSM7980961
EGR1_FOS-clone_1-6_hrs-R3
GSM7980962
EGR1_FOS-clone_1-utr1-R1
GSM7980963
EGR1_FOS-clone_1-utr1-R2
GSM7980964
EGR1_FOS-clone_1-utr1-R3
GSM7980965
EGR1_FOS-clone_1-utr2-R1
GSM7980966
EGR1_FOS-clone_1-utr2-R2
GSM7980967
EGR1_FOS-clone_1-utr2-R3
GSM7980968
EGR1_FOS-clone_2-12_hrs-R1
GSM7980969
EGR1_FOS-clone_2-12_hrs-R2
GSM7980970
EGR1_FOS-clone_2-12_hrs-R3
GSM7980971
EGR1_FOS-clone_2-18_hrs-R1
GSM7980972
EGR1_FOS-clone_2-18_hrs-R2
GSM7980973
EGR1_FOS-clone_2-18_hrs-R3
GSM7980974
EGR1_FOS-clone_2-6_hrs-R1
GSM7980975
EGR1_FOS-clone_2-6_hrs-R2
GSM7980976
EGR1_FOS-clone_2-6_hrs-R3
GSM7980977
EGR1_FOS-clone_2-utr1-R1
GSM7980978
EGR1_FOS-clone_2-utr1-R2
GSM7980979
EGR1_FOS-clone_2-utr1-R3
GSM7980980
EGR1_FOS-clone_2-utr2-R1
GSM7980981
EGR1_FOS-clone_2-utr2-R2
GSM7980982
EGR1_FOS-clone_2-utr2-R3
GSM7980983
EGR1_FOS-clone_3-12_hrs-R1
GSM7980984
EGR1_FOS-clone_3-12_hrs-R2
GSM7980985
EGR1_FOS-clone_3-12_hrs-R3
GSM7980986
EGR1_FOS-clone_3-18_hrs-R1
GSM7980987
EGR1_FOS-clone_3-18_hrs-R2
GSM7980988
EGR1_FOS-clone_3-18_hrs-R3
GSM7980989
EGR1_FOS-clone_3-6_hrs-R1
GSM7980990
EGR1_FOS-clone_3-6_hrs-R2
GSM7980991
EGR1_FOS-clone_3-6_hrs-R3
GSM7980992
EGR1_FOS-clone_3-utr1-R1
GSM7980993
EGR1_FOS-clone_3-utr1-R2
GSM7980994
EGR1_FOS-clone_3-utr1-R3
GSM7980995
EGR1_FOS-clone_3-utr2-R1
GSM7980996
EGR1_FOS-clone_3-utr2-R2
GSM7980997
EGR1_FOS-clone_3-utr2-R3
GSM7980998
FOS_EGR1-clone_1-12_hrs-R1
GSM7980999
FOS_EGR1-clone_1-12_hrs-R2
GSM7981000
FOS_EGR1-clone_1-18_hrs-R1
GSM7981001
FOS_EGR1-clone_1-18_hrs-R2
GSM7981002
FOS_EGR1-clone_1-6_hrs-R1
GSM7981003
FOS_EGR1-clone_1-6_hrs-R2
GSM7981004
FOS_EGR1-clone_1-utr1-R1
GSM7981005
FOS_EGR1-clone_1-utr1-R2
GSM7981006
FOS_EGR1-clone_1-utr2-R1
GSM7981007
FOS_EGR1-clone_1-utr2-R2
GSM7981008
FOS_EGR1-clone_2-12_hrs-R1
GSM7981009
FOS_EGR1-clone_2-12_hrs-R2
GSM7981010
FOS_EGR1-clone_2-18_hrs-R1
GSM7981011
FOS_EGR1-clone_2-18_hrs-R2
GSM7981012
FOS_EGR1-clone_2-6_hrs-R1
GSM7981013
FOS_EGR1-clone_2-6_hrs-R2
GSM7981014
FOS_EGR1-clone_2-utr1-R1
GSM7981015
FOS_EGR1-clone_2-utr1-R2
GSM7981016
FOS_EGR1-clone_2-utr2-R1
GSM7981017
FOS_EGR1-clone_2-utr2-R2
GSM7981018
EGR1-clone_1-12_hrs-R1
GSM7981019
EGR1-clone_1-12_hrs-R2
GSM7981020
EGR1-clone_1-18_hrs-R1
GSM7981021
EGR1-clone_1-18_hrs-R2
GSM7981022
EGR1-clone_1-6_hrs-R1
GSM7981023
EGR1-clone_1-6_hrs-R2
GSM7981024
EGR1-clone_1-utr1-R1
GSM7981025
EGR1-clone_1-utr1-R2
GSM7981026
EGR1-clone_1-utr2-R1
GSM7981027
EGR1-clone_1-utr2-R2
GSM7981028
EGR1-clone_2-12_hrs-R1
GSM7981029
EGR1-clone_2-12_hrs-R2
GSM7981030
EGR1-clone_2-18_hrs-R1
GSM7981031
EGR1-clone_2-18_hrs-R2
GSM7981032
EGR1-clone_2-6_hrs-R1
GSM7981033
EGR1-clone_2-6_hrs-R2
GSM7981034
EGR1-clone_2-utr1-R1
GSM7981035
EGR1-clone_2-utr1-R2
GSM7981036
EGR1-clone_2-utr2-R1
GSM7981037
EGR1-clone_2-utr2-R2
GSM7981038
FOS-clone_1-12_hrs-R1
GSM7981039
FOS-clone_1-12_hrs-R2
GSM7981040
FOS-clone_1-18_hrs-R1
GSM7981041
FOS-clone_1-18_hrs-R2
GSM7981042
FOS-clone_1-6_hrs-R1
GSM7981043
FOS-clone_1-6_hrs-R2
GSM7981044
FOS-clone_1-utr1-R1
GSM7981045
FOS-clone_1-utr1-R2
GSM7981046
FOS-clone_1-utr2-R1
GSM7981047
FOS-clone_1-utr2-R2
GSM7981048
FOS-mix-6_hrs-R1
GSM7981049
FOS-mix-12_hrs-R1
GSM7981050
FOS-mix-18_hrs-R1
GSM7981051
FOS-mix-utr1-R1
GSM7981052
FOS-mix-utr2-R1
GSM7981053
WT-clone_1-12_hrs-R1
GSM7981054
WT-clone_1-12_hrs-R2
GSM7981055
WT-clone_1-18_hrs-R1
GSM7981056
WT-clone_1-18_hrs-R2
GSM7981057
WT-clone_1-6_hrs-R1
GSM7981058
WT-clone_1-6_hrs-R2
GSM7981059
WT-clone_1-utr1-R1
GSM7981060
WT-clone_1-utr1-R2
GSM7981061
WT-clone_1-utr2-R1
GSM7981062
WT-clone_1-utr2-R2
GSM7981063
WT-clone_2-6_hrs-R1
GSM7981064
WT-clone_2-12_hrs-R1
GSM7981065
WT-clone_2-18_hrs-R1
GSM7981066
WT-clone_2-utr1-R1
GSM7981067
WT-clone_2-utr2-R1
GSM7981068
WT-clone_3-12_hrs-R1
GSM7981069
WT-clone_3-12_hrs-R2
GSM7981070
WT-clone_3-18_hrs-R1
GSM7981071
WT-clone_3-18_hrs-R2
GSM7981072
WT-clone_3-6_hrs-R1
GSM7981073
WT-clone_3-6_hrs-R2
GSM7981074
WT-clone_3-utr1-R1
GSM7981075
WT-clone_3-utr1-R2
GSM7981076
WT-clone_3-utr2-R1
GSM7981077
WT-clone_3-utr2-R2
GSM7981078
WT-clone_4-12_hrs-R1
GSM7981079
WT-clone_4-12_hrs-R2
GSM7981080
WT-clone_4-18_hrs-R1
GSM7981081
WT-clone_4-18_hrs-R2
GSM7981082
WT-clone_4-6_hrs-R1
GSM7981083
WT-clone_4-6_hrs-R2
GSM7981084
WT-clone_4-utr1-R1
GSM7981085
WT-clone_4-utr1-R2
GSM7981086
WT-clone_4-utr2-R1
GSM7981087
WT-clone_4-utr2-R2
GSM7981088
WT-clone_5-6_hrs-R1
GSM7981089
WT-clone_5-12_hrs-R1
GSM7981090
WT-clone_5-18_hrs-R1
GSM7981091
WT-clone_5-utr1-R1
GSM7981092
WT-clone_5-utr2-R1
GSM7981093
run1a_05h_1h
GSM7981094
run1a_05h_2h
GSM7981095
run1a_05h_4h
GSM7981096
run1a_05h_8h
GSM7981097
run1a_1h_2h
GSM7981098
run1a_1h_4h
GSM7981099
run1a_1h_8h
GSM7981100
run1a_2h_4h
GSM7981101
run1a_2h_8h
GSM7981102
run1a_4h_8h
GSM7981103
run1a_8h_05h
GSM7981104
run1a_8h_0h
GSM7981105
run1a_8h_1h
GSM7981106
run1a_8h_2h
GSM7981107
run1a_8h_4h
GSM7981108
run1a_8h_8h
GSM7981109
run1b_8h_0h
GSM7981110
run1b_8h_2h
GSM7981111
run2a_8h_05h
GSM7981112
run2a_8h_0h
GSM7981113
run2a_8h_1h
GSM7981114
run2a_8h_2h
GSM7981115
run2a_8h_4h
GSM7981116
run2a_8h_8h
GSM7981571
HEK_RAF_ER_6h_R1_GE
GSM7981572
HEK_RAF_ER_6h_R2_GE
GSM7981573
HEK_RAF_ER_12h_R1_GE
GSM7981574
HEK_RAF_ER_12h_R2_GE
GSM7981575
HEK_RAF_ER_18h_R1_GE
GSM7981576
HEK_RAF_ER_18h_R2_GE
GSM7981577
HEK_RAF_ER_6h_R1_Guides
GSM7981578
HEK_RAF_ER_6h_R2_Guides
GSM7981579
HEK_RAF_ER_12h_R1_Guides
GSM7981580
HEK_RAF_ER_12h_R2_Guides
GSM7981581
HEK_RAF_ER_18h_R1_Guides
GSM7981582
HEK_RAF_ER_18h_R2_Guides
GSM7981583
HEK_RAF_ER_6h_R1_Targeted
GSM7981584
HEK_RAF_ER_6h_R2_Targeted
GSM7981585
HEK_RAF_ER_12h_R1_Targeted
GSM7981586
HEK_RAF_ER_12h_R2_Targeted
GSM7981587
HEK_RAF_ER_18h_R1_Targeted
GSM7981588
HEK_RAF_ER_18h_R2_Targeted
This SuperSeries is composed of the following SubSeries:
GSE250532
Effects of kockouts of EGR1, FOS and their combination on the MAPK induced transcriptome [RNA_KO_clones]
GSE250533
Transcriptome analysis of pulsed activation of MAPK signaling in HEK-RAF-ER cells [RNA_seq_pulse_time_series]
GSE250558
Targeted Perturb-seq of regulators of the transcriptional network downstream of RAF-MAPK signaling [perturb_seq]
Relations
BioProject
PRJNA1054526
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
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File type/resource
GSE250559_RAW.tar
1.1 Gb
(http)
(custom)
TAR (of CSV, H5, TAB, TXT)
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