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Status
Public on Mar 27, 2012
Title
Agilent-021193 Canine (V2) Gene Expression Microarray (ProbeName version)
Technology type
in situ oligonucleotide
Distribution
commercial
Organism
Canis lupus familiaris
Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Description
This is the ProbeName version of GPL13605 [Feature Number version] C. familiaris (Dog) Oligo Microarray (V2) Arrays of this design have barcodes that begin with 16021193 or 2521193. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
Submission date
Mar 27, 2012
Last update date
Mar 08, 2016
Organization
Agilent Technologies
E-mail(s)
cag_sales-na@agilent.com
Phone
877-424-4536
URL
http://www.agilent.com
Department
Street address
City
Palo Alto
State/province
CA
ZIP/Postal code
94304
Country
USA
Samples (126)
GSM902911 , GSM902912 , GSM902913 , GSM902914 , GSM902915 , GSM902916
GSM902917 ,
GSM902918 ,
GSM902919 ,
GSM902920 ,
GSM902921 ,
GSM902922 ,
GSM1071640 ,
GSM1071641 ,
GSM1071642 ,
GSM1071643 ,
GSM1086279 ,
GSM1174758 ,
GSM1174759 ,
GSM1174760 ,
GSM1174761 ,
GSM1174762 ,
GSM1174763 ,
GSM1174764 ,
GSM1174765 ,
GSM1174766 ,
GSM1174767 ,
GSM1174768 ,
GSM1174769 ,
GSM1174770 ,
GSM1174771 ,
GSM1174772 ,
GSM1174773 ,
GSM1174774 ,
GSM1174775 ,
GSM1174776 ,
GSM1174777 ,
GSM1174778 ,
GSM1174779 ,
GSM1174780 ,
GSM1174781 ,
GSM1174782 ,
GSM1174783 ,
GSM1174784 ,
GSM1174785 ,
GSM1174786 ,
GSM1174787 ,
GSM1174788 ,
GSM1174789 ,
GSM1174790 ,
GSM1174791 ,
GSM1174792 ,
GSM1174793 ,
GSM1174794 ,
GSM1174795 ,
GSM1174796 ,
GSM1174797 ,
GSM1174798 ,
GSM1174799 ,
GSM1174800 ,
GSM1174801 ,
GSM1174802 ,
GSM1174803 ,
GSM1174804 ,
GSM1174805 ,
GSM1174806 ,
GSM1174807 ,
GSM1174808 ,
GSM1174809 ,
GSM1204546 ,
GSM1204547 ,
GSM1204548 ,
GSM1204549 ,
GSM1204550 ,
GSM1204551 ,
GSM1204552 ,
GSM1204553 ,
GSM1204554 ,
GSM1204555 ,
GSM1204556 ,
GSM1204557 ,
GSM1204558 ,
GSM1204559 ,
GSM1204560 ,
GSM1204561 ,
GSM1204562 ,
GSM1204563 ,
GSM1204564 ,
GSM1204565 ,
GSM2042949 ,
GSM2042950 ,
GSM2083145 ,
GSM2083146 ,
GSM2083147 ,
GSM2083148 ,
GSM2083149 ,
GSM2083150 ,
GSM2083151 ,
GSM2083152 ,
GSM2083153 ,
GSM2083154 ,
GSM2083155 ,
GSM2083156 ,
GSM2817928 ,
GSM2817929 ,
GSM2817930 ,
GSM3153063 ,
GSM3153064 ,
GSM3153065 ,
GSM3153066 ,
GSM3153067 ,
GSM3153068 ,
GSM3153069 ,
GSM3153070 ,
GSM6727278 ,
GSM6727279 ,
GSM6727280 ,
GSM6727281 ,
GSM6727282 ,
GSM6727283 ,
GSM7567229 ,
GSM7567230 ,
GSM7567231 ,
GSM7567232 ,
GSM7567233 ,
GSM7567234
Series (11)
GSE36848
Acid Stress Increases Gene Expression of Proinflammatory Cytokines in Madin Darby Canine Kidney Cells
GSE43813
The Severe Pathogenicity of Infected Ferrets Depleted of Alveolar Macrophages with 2009 Pandemic H1N1 Influenza Virus
GSE44545
H3N2 canine influenza virus causes severe clinical signs in dogs with induction of genes related to inflammation and apoptosis
GSE48319
The transcriptomic profile of peripheral blood nuclear cells in dogs with heart failure
GSE49659
Retinal Gene and Protein Expression Associated with CNTF-Induced Deconstruction of Photoreceptor Outer Segments in normal and CNGB3-achromatopsia dogs
GSE77041
Canine keratinocyte cell line: Unstimulated control (UC) vs. Samples stimulated by recombinant periostin (PO).
GSE78988
Change in gene expression of a canine melanoma cell line caused by exposure to nonsteroidal anti-inflammatory drugs (NSAIDs) .
GSE105098
Gene expression profile of small intestinal mucosa in dog repeatedly infected with the cestode Echinococcus multilocularis
GSE114888
Development of gene signatures for doxorubicin resistance and cancer stem cell CD44+, CD24-/low ALD+ isolated from canine mammary adenocarcinoma cell line (mRNA)
GSE217830
Gene expression signatures of MDCK-pTR GFP-RasV12 mCherry-β-catenin Δ131 cells cultured alone or mixed with MDCK mCherry-β-catenin Δ131 cells
GSE236658
Gene expression signatures of MDCK-pTR GFP-RasV12 cells cultured alone or mixed with MDCK cells
Relations
Alternative to
GPL13605
Data table header descriptions
ID
ProbeName
SPOT_ID
Spot identifier
CONTROL_TYPE
Control type
REFSEQ
RefSeqAccession
GB_ACC
GenBankAccession
LOCUSLINK_ID
LocuslinkID
GENE_SYMBOL
Gene Symbol
GENE_NAME
Gene Name
UNIGENE_ID
UnigeneID
ENSEMBL_ID
EnsemblID
ACCESSION_STRING
Accession String
CHROMOSOMAL_LOCATION
Chromosomal Location
DESCRIPTION
Description
GO_ID
GoIDs
SEQUENCE
Sequence
SPOT_ID
ORF
Gene symbol
Data table
ID
SPOT_ID
CONTROL_TYPE
REFSEQ
GB_ACC
LOCUSLINK_ID
GENE_SYMBOL
GENE_NAME
UNIGENE_ID
ENSEMBL_ID
ACCESSION_STRING
CHROMOSOMAL_LOCATION
DESCRIPTION
GO_ID
SEQUENCE
SPOT_ID
ORF
(+)E1A_r60_1
(+)E1A_r60_1
pos
CONTROL
(+)E1A_r60_3
(+)E1A_r60_3
pos
CONTROL
(+)E1A_r60_a104
(+)E1A_r60_a104
pos
CONTROL
(+)E1A_r60_a107
(+)E1A_r60_a107
pos
CONTROL
(+)E1A_r60_a135
(+)E1A_r60_a135
pos
CONTROL
(+)E1A_r60_a20
(+)E1A_r60_a20
pos
CONTROL
(+)E1A_r60_a22
(+)E1A_r60_a22
pos
CONTROL
(+)E1A_r60_a97
(+)E1A_r60_a97
pos
CONTROL
(+)E1A_r60_n11
(+)E1A_r60_n11
pos
CONTROL
(+)E1A_r60_n9
(+)E1A_r60_n9
pos
CONTROL
(+)eQC-39
(+)eQC-39
pos
CONTROL
(+)eQC-40
(+)eQC-40
pos
CONTROL
(+)eQC-41
(+)eQC-41
pos
CONTROL
(+)eQC-42
(+)eQC-42
pos
CONTROL
(-)3xSLv1
(-)3xSLv1
neg
CONTROL
A_11_P000001
A_11_P000001
FALSE
ENSCAFT00000000071
ens|ENSCAFT00000000071
chr10:3032814-3032873
olfactory receptor, family 10, subfamily P, member [Source:HGNC Symbol;Acc:15378] [ENSCAFT00000000071]
AACAAGGAGGTGGCAAGGGCCCTGCAGCGCATGGTGAAGAGGGAGGTCTCCTCACCATGA
A_11_P0000010
A_11_P0000010
FALSE
XM_848975
611318
LOC611318
similar to F55A4.8a
Cfa.2541
ENSCAFT00000000298
ens|ENSCAFT00000000298|gb|XM_848975|tc|TC69393
chr1:28838999-28837308
chromosome 6 open reading frame 192 [Source:HGNC Symbol;Acc:21573] [ENSCAFT00000000298]
CATCTCTGCTGGGAAGAGTATAATTCCAACTATCCCGGAGATCCTCAGTTGTGCATATGA
LOC611318
A_11_P00000100
A_11_P00000100
FALSE
XM_846583
Cfa.21391
ENSCAFT00000002787
ens|ENSCAFT00000002787|gb|XM_846583|tc|TC76630
chr14:014867491-014867435
leiomodin 2 (cardiac) [Source:HGNC Symbol;Acc:6648] [ENSCAFT00000002787]
GCTCAGGGACAACACGACGCTGCTGAGGCTGGGGCTACCCACTTCGAGCCTCCCGGGACC
A_11_P000001000
A_11_P000001000
FALSE
XM_846910
610026
NAE1
NEDD8 activating enzyme Esubunit 1
Cfa.39474
ENSCAFT00000032493
ens|ENSCAFT00000032493|gb|XM_846910|tc|TC77843
chr5:85480882-85480941
NEDD8 activating enzyme Esubunit [Source:HGNC Symbol;Acc:621] [ENSCAFT00000032493]
GATAAACCATTTCCTGAACTGAGAGAACATTTTCAGTCTTATGATTTGGATCGTATGGAA
NAE1
A_11_P0000010000
A_11_P0000010000
FALSE
CO626098
Cfa.35376
gb|CO626098
chr37:16857989-16853253
DG9-270f8 DG9-ovary Canis familiaris cDNA 3', mRNA sequence [CO626098]
TTACAGAACACCCTTCAAGGTCCATGCTCTTTGAGGCTTTCAGATTCATTGATTCGGGCT
Total number of rows: 43663 Table truncated, full table size 12457 Kbytes .
Supplementary data files not provided