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Series GSE2730 Query DataSets for GSE2730
Status Public on Jun 03, 2005
Title ENCODE: GWLA analysis of a few promoter and enhancer markers in HeLa cells
Project Pilot ENCODE
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by genome tiling array
Summary GWLA analysis of a few promoter and enhancer markers in Hela cells.
Keywords: ChIP/chip
 
Overall design Using tiling array covered non-repetitive encode regions, ChIP/chip was done using chromatin extracted from both induced and uninduced HeLa cells and a few antibodies.
Web link http://www.ncbi.nlm.nih.gov/projects/geo/info/ENCODE.html
 
Contributor(s) Heintzman N, van Calcar S, Stuart R, Ren B
Citation(s) 17571346
BioProject PRJNA63421
Submission date Jun 01, 2005
Last update date Sep 14, 2012
Contact name Chunxu Qu
E-mail(s) qchunxu@ucsd.edu
Phone (858)822-5767
Organization name Ludwig Institute for Cancer Research
Department Gene Regulation
Lab RenLab
Street address
City San Diego
State/province CA
ZIP/Postal code 92093
Country USA
 
Platforms (1)
GPL1454 RenLab ENCODE PCR tiling array
Samples (51)
GSM52457 trimethylated K4 histone 3 in HeLa cell, 0 minute - rep1 of 3
GSM52458 trimethylated K4 histone 3 in HeLa cell, 0 minute - rep2 of 3
GSM52459 trimethylated K4 histone 3 in HeLa cell, 0 minute - rep3 of 3

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE2730_RAW.tar 725.4 Mb (http)(custom) TAR (of GPR, TIFF)

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